Koofers

Ch. 4 - Flashcards

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Class:BIOL 101 - General Biology I
Subject:Biology (BIOL)
University:Southwestern Michigan College
Term:Spring 2011
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Lumen
internal cavity of the ER
Rough ER
studded with ribosomes, chemically modifies recently synthesized proteins
Smooth ER no ribosomes, synthesizes and metabolizes lipids and detoxifies effects of alcohol
ribosome responsible for carrying out protein synthesis.
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Golgi complex froms structures that stay in the cells, also helps prepare materials fro export outside the cell
(consists of sets of flattened discs)
cell membrane separates the interior of all cells from the outside environment.
nuclear envelope double lipid bilayer that encloses the genetic material in eukaryotic cells.
separates the nucleus from the cytoplasm of the cell
Nucleolus
synthesizes ribosomes
composed of ribosomal RNA and protein
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Chromatin Chromatin is the combination of DNA and proteins that make up the contents of the nucleus of a cell.
chromosome long complex DNA and protein divided into rod-like structures
centriole barrel-shaped cell structure found in most E cells
centrosome organelle that serves as the main microtubule organizing center of E cell
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cytoskeleton intricate network of protein fibers which gives cell shape, holds organelles in place and participates in cell movement.
(contained within the cytosol)
mitochondria responsible for most of the ATP production that takes place within the cell 
nucleoid In prokaryotes
part of a cell that contain's the cell's DNA
not surrounded by a membrane
residual body In lysosomal digestion, residual bodies are vesicles containing indigestible materials.
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pilus In bacteria
long appendage that serves as the means of attachment of conjugating bacteria and a conduit for the transfer of DNA
plasmid genetic engineering "accessory info"
1)antibiotic resistance
2)oil degradation
3)pili production
4)toxin production
matrix intercellular substance within a tissue, or the interior substance of mitochondrion
stroma fluid filled cavity within the inner membrane of the chloroplast
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flagella Long
few per cell
example protozoan: Euglena
example human cell: Sperm

Eukaryotic Flagella
whips
Prokaryotic Flagella
rotates in circle to act as propeller

cilia Short
numerous
example protozoan: Paramecium
example human cell: oviduct lining
pattern of motion: wave-like
cell wall rigid thick structure that surrounds the cell membrane in plant cells
(protects and supports cell)
lysosome 1. intracellular digestion (hydrolytic enzymes)
2. defense
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peroxisome breakdown of H2o2 (peroxide)
contains catalase enzymes (oxidative enzymes)
proteasome break up old proteins, so the amino acids can be recycled
polysome chain of ribosomes on the ER
cytoplasm part of the cell that lies between nuclear ad cell membrane that holds all the cell's internal sub-structures.
( gel-like substance)
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cytosol the part of the cytoplasm not contained within membrane enclosed organelles
( liquid found inside cells)
secretory vesicle transport newly made glycoproteins to the cell membrane for secretion outside the cell.
chloroplast photosynthesis, tends to temporarily store newly made sugars
contains chlorophyll pigment
chromoplast contain the pigments that give yellow orange and red colors to flowers, fruits, vegetable, and autumn leaves
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cristae elaborate folds of the inner membrane
amyloplast stores starches and are abundant in grain, seeds, and some vegetables
granum stacks of thylakoids
thylakoid flattened disc surrounded by innermost membranes of a chloroplast
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middle lamella glue-like pectin composes this structure which lies between the cell walls of adjacent plant cells
plasmodesmata fine narrow channels between plant cells through which thin strands of cytoplasm stream and allow molecule passage from cell to cell


desmosome anchors or rivets adjacent animal cells together without interfering with passage of molecules between cells
gap junction protein channels between adjacent animal cell membranes through which molecules can move from cell to cell


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tight junction fuses membranes of adjacent animal cells together to bind adjacent cells together and prevent leakage between cells

MTOC microtubule organizing center
central vacuole provides turgor pressure; contains water and wastes
microfilaments (actin filaments) thinnest in diameter
anchored to the cell surface and provide force for movement and shape changes
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microtubules
thickest in diameter
hollow cylinders
distribute DNA and other materials to the two daughter cells

intermediate filaments subject to mechanical stress
strengthen cells and tissues

nucleoprotein any protein that is structurally associated with nucleic acid.
DNA Deoxyribonucleic acid contains the genetic instructions used in the development and functioning of all known living organisms
two functions
1. replicate
2. transcription
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pectin sticky polysaccharide
actin single kind of protein present in muscle fibers
keratin strengthens wool, hair, fingernails, and the outer layers of the skin
mRNA Messenger RNA is a molecule of RNA encoding a chemical "blueprint" for a protein product.
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tubulin one of two globular proteins, from which microtubules are assembled
peptidoglycan mixture of polysaccharides and polypeptides that form the bacterial cell wall
cellulose polysaccharide that composes the cell wall
phospholipid major component of all cell membranes
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protein transmembrane
span the entire lipid bilayer

peripheral
only penetrates one surface (typically outer)
Leewenhoek discovered bacteria and magnifying lens
Hooke coined the term cell when observing cork
Virchow all cells come from pre-existing cells
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Schwan all animals consist of cells
Davson-Danielli lipid sandwich model
Singer-Nicholson fluid mosaic model
plasmolysis process in plant cells where the plasma membrane pulls away from the cell wall due to the loss of water through osmosis.
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lysis breaking down of a cell
replication biological process that occurs in all living organisms and copies their DNA
transcription DNA to RNA to ribosomes (making of mRNA)
chromatin
translation DNA to mRNA
on nucleolus
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secretion elimination of a functional product from a cell into environment
1. hormones
2. antibodies
3. extracellular enzymes
4. neurotransmitters
ingestion phagocytosis
cells engulf large particles - plasma membrane extends outward and surrounds the particle
endocytosis
cell takes in tiny amounts of materials in vesicles that arise by the inward folding of the plasma membrane
egestion elimination of solid wastes
excretion elimination of liquid wastes
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extracellular digestion (outside of cell)
involves secretion of enzymes by cell to work outside cell to break down large molecules in environment of cell into smaller molecules
intracellular digestion (within cell)
involves fusion of food vacuole or endocytic vesicle with lysosome which results in formation of residual body
pinocytosis cell takes up any bits of liquid and dissolved molecules
receptor-mediated endocytosis cell take up only specific substances recognized by protein receptors on the surface of the cell
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turgor pressure pressure of a plant cell's contents against its cell wall
centrifugation method fro separating molecules according to size and shape by subjecting them to high gravitational fields in a spinning tube
active transport requires energy, moves against conc. gradient (low to high), protein involvement
passive transport occurs spontaneously without spending energy, molecules move according to conc. gradient (high to low), protein involvement
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simple diffusion random movement of like molecules or ions from and area of high conc. to an area of low conc.
factors that affect rate:
1. increase temp
2. stirring
3. steeper conc. gradient
4. break large molecules down to small molecules that make it up
osmosis movement of water across any selectively permeable membrane in response to a conc. gradient
carrier-mediated facilitated diffusion carrier proteins bind to the substance they transport, then changes shape, opening a path to the opp. side of the membrane, then substance unbinds having crossed the membrane
channel-mediated facilitated diffusion channel proteins provide a pore through which the substance can diffuse but the pore's structure only permits substances of a certain size and electrical charge to pass through
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sodium potassium pump (Na+ K+) transports sodium ions out of cells and potassium ions into cells using the energy of ATP
use of carrier proteins
Cotransport carrier proteins move a substance across a membrane against its conc. gradient. Transport of one substance is coupled to transport of another.
endosymbiosis Theory:
primitive E cell that had no mitochondria engulfed heterotrophic bacteria and membranes fused together making it an organelle
Hypertonic high solute/ low water conc.
shrivels 
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Hypotonic low solute/ high water conc.
swells
Isotonic equal solute/ water conc.
remains intact
Fluid mosaic model lipid layers are fluid and the proteins are considered mosaic
Five Statements:
1. basic structure of membrane is a lipid bilayer
2. proteins are dispersed through membrane like stones in a mosaic
3. membrane is fluid
4. lipid bilayer severs as a hydrophobic barrier
5. some membrane proteins help transport specific molecules across membrane
Cell communication methods Chemical signals
Physical communication
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Scanning Electron Microscope beams of electrons hit the surface and bounce back
3-D surface appearance
drawback: can't view internal detail
Transmission Electron Microscope beams of electrons go through specimen
2-D image of internal detail
drawback: can't view surface structures
Compound Light Microscope uses light rays, glass lenses, and the image is seen in the eyepiece
Also has lower magnification and resolution
Electron Microscope uses electromagnets and beams of electrons
advantage: much more detailed images, greater mag. and resolution
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Surface area to Volume ratio when a cell grows in size this ratio decreases 
(per volume less surface area)
Prokaryotic Cells
no nucleus (limited region-nucleotide)
no organelles
smaller .4 to 5 M
70S ribosomes (free floating)
no cytoskeleton

Eukaryotic Cells genetic material within nucleus
organelles
larger 10 to 100 M
80S ribosomes (bound to ER)
cytoskeleton within cytoplasm
Plant vs. Animal plant
1. cell wall
2. vacuole
3. chloroplast

animal
1. centrioles
2. lysosomes
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Photosynthesis C6H12O6---> 6C02+6H2O
Respiration 6CO2+6H2O---> 6CO2+C6H12O6
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List View: Terms & Definitions

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 Lumen
internal cavity of the ER
 Rough ER
studded with ribosomes, chemically modifies recently synthesized proteins
 Smooth ERno ribosomes, synthesizes and metabolizes lipids and detoxifies effects of alcohol
 ribosomeresponsible for carrying out protein synthesis.
 Golgi complexfroms structures that stay in the cells, also helps prepare materials fro export outside the cell
(consists of sets of flattened discs)
 cell membraneseparates the interior of all cells from the outside environment.
 nuclear envelopedouble lipid bilayer that encloses the genetic material in eukaryotic cells.
separates the nucleus from the cytoplasm of the cell
 Nucleolus
synthesizes ribosomes
composed of ribosomal RNA and protein
 ChromatinChromatin is the combination of DNA and proteins that make up the contents of the nucleus of a cell.
 chromosomelong complex DNA and protein divided into rod-like structures
 centriolebarrel-shaped cell structure found in most E cells
 centrosomeorganelle that serves as the main microtubule organizing center of E cell
 cytoskeletonintricate network of protein fibers which gives cell shape, holds organelles in place and participates in cell movement.
(contained within the cytosol)
 mitochondriaresponsible for most of the ATP production that takes place within the cell 
 nucleoidIn prokaryotes
part of a cell that contain's the cell's DNA
not surrounded by a membrane
 residual bodyIn lysosomal digestion, residual bodies are vesicles containing indigestible materials.
 pilusIn bacteria
long appendage that serves as the means of attachment of conjugating bacteria and a conduit for the transfer of DNA
 plasmidgenetic engineering "accessory info"
1)antibiotic resistance
2)oil degradation
3)pili production
4)toxin production
 matrixintercellular substance within a tissue, or the interior substance of mitochondrion
 stromafluid filled cavity within the inner membrane of the chloroplast
 flagellaLong
few per cell
example protozoan: Euglena
example human cell: Sperm

Eukaryotic Flagella
whips
Prokaryotic Flagella
rotates in circle to act as propeller

 ciliaShort
numerous
example protozoan: Paramecium
example human cell: oviduct lining
pattern of motion: wave-like
 cell wallrigid thick structure that surrounds the cell membrane in plant cells
(protects and supports cell)
 lysosome1. intracellular digestion (hydrolytic enzymes)
2. defense
 peroxisomebreakdown of H2o2 (peroxide)
contains catalase enzymes (oxidative enzymes)
 proteasomebreak up old proteins, so the amino acids can be recycled
 polysomechain of ribosomes on the ER
 cytoplasmpart of the cell that lies between nuclear ad cell membrane that holds all the cell's internal sub-structures.
( gel-like substance)
 cytosolthe part of the cytoplasm not contained within membrane enclosed organelles
( liquid found inside cells)
 secretory vesicletransport newly made glycoproteins to the cell membrane for secretion outside the cell.
 chloroplastphotosynthesis, tends to temporarily store newly made sugars
contains chlorophyll pigment
 chromoplastcontain the pigments that give yellow orange and red colors to flowers, fruits, vegetable, and autumn leaves
 cristaeelaborate folds of the inner membrane
 amyloplaststores starches and are abundant in grain, seeds, and some vegetables
 granumstacks of thylakoids
 thylakoidflattened disc surrounded by innermost membranes of a chloroplast
 middle lamellaglue-like pectin composes this structure which lies between the cell walls of adjacent plant cells
 plasmodesmatafine narrow channels between plant cells through which thin strands of cytoplasm stream and allow molecule passage from cell to cell


 desmosomeanchors or rivets adjacent animal cells together without interfering with passage of molecules between cells
 gap junctionprotein channels between adjacent animal cell membranes through which molecules can move from cell to cell


 tight junctionfuses membranes of adjacent animal cells together to bind adjacent cells together and prevent leakage between cells

 MTOCmicrotubule organizing center
 central vacuoleprovides turgor pressure; contains water and wastes
 microfilaments (actin filaments)thinnest in diameter
anchored to the cell surface and provide force for movement and shape changes
 microtubules
thickest in diameter
hollow cylinders
distribute DNA and other materials to the two daughter cells

 intermediate filamentssubject to mechanical stress
strengthen cells and tissues

 nucleoproteinany protein that is structurally associated with nucleic acid.
 DNADeoxyribonucleic acid contains the genetic instructions used in the development and functioning of all known living organisms
two functions
1. replicate
2. transcription
 pectinsticky polysaccharide
 actinsingle kind of protein present in muscle fibers
 keratinstrengthens wool, hair, fingernails, and the outer layers of the skin
 mRNAMessenger RNA is a molecule of RNA encoding a chemical "blueprint" for a protein product.
 tubulinone of two globular proteins, from which microtubules are assembled
 peptidoglycanmixture of polysaccharides and polypeptides that form the bacterial cell wall
 cellulosepolysaccharide that composes the cell wall
 phospholipidmajor component of all cell membranes
 proteintransmembrane
span the entire lipid bilayer

peripheral
only penetrates one surface (typically outer)
 Leewenhoekdiscovered bacteria and magnifying lens
 Hookecoined the term cell when observing cork
 Virchowall cells come from pre-existing cells
 Schwanall animals consist of cells
 Davson-Daniellilipid sandwich model
 Singer-Nicholsonfluid mosaic model
 plasmolysisprocess in plant cells where the plasma membrane pulls away from the cell wall due to the loss of water through osmosis.
 lysisbreaking down of a cell
 replicationbiological process that occurs in all living organisms and copies their DNA
 transcriptionDNA to RNA to ribosomes (making of mRNA)
chromatin
 translationDNA to mRNA
on nucleolus
 secretionelimination of a functional product from a cell into environment
1. hormones
2. antibodies
3. extracellular enzymes
4. neurotransmitters
 ingestionphagocytosis
cells engulf large particles - plasma membrane extends outward and surrounds the particle
endocytosis
cell takes in tiny amounts of materials in vesicles that arise by the inward folding of the plasma membrane
 egestionelimination of solid wastes
 excretionelimination of liquid wastes
 extracellular digestion(outside of cell)
involves secretion of enzymes by cell to work outside cell to break down large molecules in environment of cell into smaller molecules
 intracellular digestion(within cell)
involves fusion of food vacuole or endocytic vesicle with lysosome which results in formation of residual body
 pinocytosiscell takes up any bits of liquid and dissolved molecules
 receptor-mediated endocytosiscell take up only specific substances recognized by protein receptors on the surface of the cell
 turgor pressurepressure of a plant cell's contents against its cell wall
 centrifugationmethod fro separating molecules according to size and shape by subjecting them to high gravitational fields in a spinning tube
 active transportrequires energy, moves against conc. gradient (low to high), protein involvement
 passive transportoccurs spontaneously without spending energy, molecules move according to conc. gradient (high to low), protein involvement
 simple diffusionrandom movement of like molecules or ions from and area of high conc. to an area of low conc.
factors that affect rate:
1. increase temp
2. stirring
3. steeper conc. gradient
4. break large molecules down to small molecules that make it up
 osmosismovement of water across any selectively permeable membrane in response to a conc. gradient
 carrier-mediated facilitated diffusioncarrier proteins bind to the substance they transport, then changes shape, opening a path to the opp. side of the membrane, then substance unbinds having crossed the membrane
 channel-mediated facilitated diffusionchannel proteins provide a pore through which the substance can diffuse but the pore's structure only permits substances of a certain size and electrical charge to pass through
 sodium potassium pump (Na+ K+)transports sodium ions out of cells and potassium ions into cells using the energy of ATP
use of carrier proteins
 Cotransportcarrier proteins move a substance across a membrane against its conc. gradient. Transport of one substance is coupled to transport of another.
 endosymbiosisTheory:
primitive E cell that had no mitochondria engulfed heterotrophic bacteria and membranes fused together making it an organelle
 Hypertonichigh solute/ low water conc.
shrivels 
 Hypotoniclow solute/ high water conc.
swells
 Isotonicequal solute/ water conc.
remains intact
 Fluid mosaic modellipid layers are fluid and the proteins are considered mosaic
Five Statements:
1. basic structure of membrane is a lipid bilayer
2. proteins are dispersed through membrane like stones in a mosaic
3. membrane is fluid
4. lipid bilayer severs as a hydrophobic barrier
5. some membrane proteins help transport specific molecules across membrane
 Cell communication methodsChemical signals
Physical communication
 Scanning Electron Microscopebeams of electrons hit the surface and bounce back
3-D surface appearance
drawback: can't view internal detail
 Transmission Electron Microscopebeams of electrons go through specimen
2-D image of internal detail
drawback: can't view surface structures
 Compound Light Microscopeuses light rays, glass lenses, and the image is seen in the eyepiece
Also has lower magnification and resolution
 Electron Microscopeuses electromagnets and beams of electrons
advantage: much more detailed images, greater mag. and resolution
 Surface area to Volume ratiowhen a cell grows in size this ratio decreases 
(per volume less surface area)
 Prokaryotic Cells
no nucleus (limited region-nucleotide)
no organelles
smaller .4 to 5 M
70S ribosomes (free floating)
no cytoskeleton

 Eukaryotic Cellsgenetic material within nucleus
organelles
larger 10 to 100 M
80S ribosomes (bound to ER)
cytoskeleton within cytoplasm
 Plant vs. Animalplant
1. cell wall
2. vacuole
3. chloroplast

animal
1. centrioles
2. lysosomes
 PhotosynthesisC6H12O6---> 6C02+6H2O
 Respiration6CO2+6H2O---> 6CO2+C6H12O6